Clinical Microbiology Laboratory

Laboratory 5:  Urine Culture Unknown and Sensitivity 

Activities:

Read E.coli Kirby-Bauer Susceptibility Plate with Instructor

Materials Needed:

  1. Sensitivity Plate

  2. Ruler with millimeter markings

  3. NCCLS Disk Susceptibility Testing: Step by Step

  4. NCCLS-M100 "Table 2. Zone Diameter Interpretative Standards and Equivalent Minimum Inhibitory Concentration (MIC) Breakpoints for Organisms Other than Haemophilus and Neisseria gonorrhoeae"

  5. Kirby Bauer Susceptibility Report Form (Green Sheet with list of antimicrobics)

  6. Enter the susceptibility report as you would to the physician in the Susceptibility Report Form

Compare E.coli and Contaminated Urine Culture Plates with Instructor

A station is set-up with culture plates for a probable infection of E.coli and other urine cultures that contain skin and vaginal contaminants. Answer the questions on the Urine Culture Comparison Worksheet for this station.

Top.

 

Demo for ONPG and PYR/Esculin Rapid Tests with Instructor

Materials Needed:

  1. Laboratory Manual p. 25 and product insert for ONPG disks.

  2. ONPG and PYR/Esculin Disks from refrigerator

  3. Serratia and Proteus culture plates to perform ONPG test

  4. Streptococcus pyogenes, Streptococcus bovis and Enterococcus faecalis culture plates to perform the PYR/Esculin tests

  5. Tube of sterile saline from refrigerator

  6. Sterile plastic tubes in cupboard under centrifuge.

 

API Set-up Demo

Materials: Day 1

  • Lab Manual pp. 35-43, especially 37

  • Culture Plate with Gram-negative Rods

  • Oxidase reagent and filter paper

  • Sterile dispo pipette

  • Sterile inoculating needle

  • Test tube rack

  • Marking pen

  • Tube of sterile 0.85% saline from refrigerator

  • API 20 E Strip

  • Incubation trays and lids

  • Squirt bottle with distilled or deionized water 

In Refrigerator

Follow the recommended procedure on page 37 in the lab manual

Materials: Day 2
  • Result sheets (in API box)
  • API reagents: Kovac's reagent, Voges-Proskauer reagent, ferric chloride, Optional: nitrate reduction reagents and zinc dust

UNIT 1 LAB PRACTICAL COMPONENTS

  • Gram Stain Quality Control Slide

  • Evaluate plate streaked the previous day and Gram Stain colony or colonies and describe the colonial morphology of each

  • Evaluate types of hemolysis

  • Identify the likely Gram stain reaction due to growth characteristics on plates such as CNA, MAC, EMB, TERG

  • Organisms growing only on chocolate, Gram stain reaction and morphology and their atmospheric preferences

  • Performance of wet prep (yeast or bacteria), catalase, oxidase, spot indole, and coagulase.

  • Know the reagent names for each of the rapid tests listed above and also the bile solubility test

  • Based on Gram stain reaction and morphology, determine whether to do oxidase or catalase.

  • Organisms that you are trying to isolate if you use MTM, SXT agar

  • Recognize the colonial appearance of Proteus, Klebsiella, E.coli, Pseudomonas

  • Rank order what specimens would be cultured first, second, third, etc.

  • Read Gram Stains for Gram stain reaction (positive or negative) and morphology (cocci, rods, yeast) and name at least one organism it could be

  • Evaluate 2 sputum specimens for quality on low power

  • A couple of safety questions

Unit 1 Practical Review

 

Clinical Microbiology Syllabus